STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swp_2169annotation not available (110 aa)    
Predicted Functional Partners:
swp_2167
annotation not available
 
 
 0.974
swp_2170
annotation not available
 
 
 0.956
swp_2168
annotation not available
 
     0.880
swp_2166
annotation not available
 
     0.813
swp_2165
annotation not available
 
     0.809
swp_1613
annotation not available
  
     0.750
swp_2164
annotation not available
 
     0.724
swp_2163
annotation not available
 
     0.688
swp_1615
annotation not available
 
 
 0.668
swp_2159
annotation not available
 
     0.649
Your Current Organism:
Shewanella piezotolerans
NCBI taxonomy Id: 225849
Other names: S. piezotolerans WP3, Shewanella piezotolerans, Shewanella piezotolerans WP3, Shewanella piezotolerans str. WP3, Shewanella piezotolerans strain WP3, Shewanella sp. WP3
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