STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swp_3487Branched-chain amino acid transport system substrate-binding protein, putative. (424 aa)    
Predicted Functional Partners:
swp_3488
Branched-chain amino acid ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
swp_3489
Branched-chain amino acid ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
swp_3491
Branched-chain amino acid ABC transporter, ATP-binding protein, putative.
 
 
 0.998
swp_3486
ABC transporter.
 
 
 0.997
swp_2919
Response regulator NasT, putative.
  
 
 0.923
swp_3485
Phenylacetate-CoA ligase, putative.
 
    0.914
swp_3490
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding, putative.
 
    0.896
swp_3803
Glutamate synthase (ferredoxin).
     
 0.645
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
  
    0.641
hisI
Phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
  
    0.577
Your Current Organism:
Shewanella piezotolerans
NCBI taxonomy Id: 225849
Other names: S. piezotolerans WP3, Shewanella piezotolerans WP3, Shewanella piezotolerans str. WP3, Shewanella piezotolerans strain WP3, Shewanella sp. WP3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.