STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP15_1251Sodium: solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (588 aa)    
Predicted Functional Partners:
HP15_1252
Membrane protein containing probable solute: sodium symporter, small subunit domain.
 
    0.965
HP15_1254
Cyclic nucleotide-binding domain (cNMP-BD) protein.
 
  
 0.936
HP15_3951
Signal-transduction protein.
 
  
 0.903
HP15_1250
Conserved hypothetical protein, membrane.
 
    0.886
HP15_1253
DNA polymerase III, epsilon subunit.
 
     0.793
HP15_1249
Two-component system sensor protein.
  
  
 0.653
HP15_2053
PrpE protein.
  
  
 0.557
HP15_3799
acetyl-CoA synthetase.
  
  
 0.557
HP15_4177
acetyl-CoA synthetase.
  
  
 0.557
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.557
Your Current Organism:
Marinobacter adhaerens
NCBI taxonomy Id: 225937
Other names: M. adhaerens HP15, Marinobacter adhaerens HP15, Marinobacter adhaerens str. HP15, Marinobacter adhaerens strain HP15, marine bacterium HP15
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