STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP15_3342Pyridoxal-dependent decarboxylase. (558 aa)    
Predicted Functional Partners:
HP15_482
Glutamate synthase subunit alpha.
    
 0.943
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.942
gabT
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.932
HP15_990
Taurine catabolism dioxygenase TauD/TfdA.
  
 
 0.922
HP15_1357
Gamma-glutamyltranspeptidase periplasmic precursor.
     
 0.917
HP15_3945
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
   
 0.916
HP15_3156
Glutamate-ammonia ligase; Belongs to the glutamine synthetase family.
  
 
 0.912
HP15_428
Glutamine synthetase, type I.
  
 
 0.912
HP15_942
Glutamate-putrescine ligase; Belongs to the glutamine synthetase family.
  
 
 0.912
HP15_2688
Trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.910
Your Current Organism:
Marinobacter adhaerens
NCBI taxonomy Id: 225937
Other names: M. adhaerens HP15, Marinobacter adhaerens HP15, Marinobacter adhaerens str. HP15, Marinobacter adhaerens strain HP15, marine bacterium HP15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.