STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP15_3476Uncharacterized conserved protein UCP028301. (165 aa)    
Predicted Functional Partners:
HP15_3475
Protein containing DUF877.
 
 
 0.997
HP15_3474
Type VI secretion system, lysozyme-related protein.
 
  
 0.982
HP15_3883
Hcp protein.
 
 
 0.978
HP15_3469
Protein containing DUF876, bacterial.
 
  
 0.977
HP15_3468
Protein containing Type IV / VI secretion system, DotU domains.
 
  
 0.959
HP15_3473
Type VI secretion system, VCA0110.
 
  
 0.957
HP15_3470
Lipoprotein.
 
  
 0.946
HP15_3472
Protein containing DUF1305.
 
  
 0.945
HP15_3462
Type VI secretion system Vgr family protein.
 
  
 0.938
HP15_3464
ImpA domain protein.
 
  
 0.929
Your Current Organism:
Marinobacter adhaerens
NCBI taxonomy Id: 225937
Other names: M. adhaerens HP15, Marinobacter adhaerens HP15, Marinobacter adhaerens str. HP15, Marinobacter adhaerens strain HP15, marine bacterium HP15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.