STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HP15_723TRAP transporter, 4TM/12TM fusion protein. (729 aa)    
Predicted Functional Partners:
HP15_722
Immunogenic protein.
 
 
  0.992
HP15_1069
TRAP transporter solute receptor, TAXI family protein.
 
    0.849
HP15_724
Periplasmic sensor signal transduction histidine kinase.
       0.514
HP15_725
Two component, sigma54 specific, transcriptional regulator, Fis family.
       0.514
HP15_726
Hypothetical protein.
       0.506
HP15_2659
Tricarboxylic transport TctA.
  
     0.488
HP15_727
Methyl-accepting chemotaxis sensory transducer.
       0.457
HP15_2560
TRAP dicarboxylate transporter- DctP subunit.
  
     0.451
Your Current Organism:
Marinobacter adhaerens
NCBI taxonomy Id: 225937
Other names: M. adhaerens HP15, Marinobacter adhaerens HP15, Marinobacter adhaerens str. HP15, Marinobacter adhaerens strain HP15, marine bacterium HP15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.