STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_0647Conserved hypothetical protein; Similar to GP:10176509; identified by sequence similarity; putative. (109 aa)    
Predicted Functional Partners:
EF_0648
Nitroreductase family protein; Similar to SP:P21502, GB:X51662, PID:41810, GB:U00096, PID:1778450, and PID:1786747; identified by sequence similarity; putative.
     
 0.566
EF_3174
Conserved hypothetical protein; Similar to SP:P27309, PID:1217911, and PID:217030; identified by sequence similarity; putative.
  
  
 0.433
EF_0826
Transcriptional regulator, PemK family; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.400
EF_0850
Transcriptional regulator, PemK family; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.400
EF_2285
Identified by match to PFAM protein family HMM PF02195.
   
    0.400
EF_3262
Transcriptional regulator, PemK family; Similar to GB:X06451; identified by sequence similarity; putative.
   
    0.400
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.