STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EF_1188Hydrolase, haloacid dehalogenase family; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. (256 aa)    
Predicted Functional Partners:
EF_1187
Conserved hypothetical protein; Similar to GP:10176056; identified by sequence similarity; putative.
 
  
 0.943
EF_1189
Conserved hypothetical protein; Identified by Glimmer2; putative.
  
    0.927
EF_1186
Identified by match to TIGR protein family HMM TIGR01390; Belongs to the 5'-nucleotidase family.
  
  
 0.877
ogt
methylated-DNA--protein-cysteine S-methyltransferase; Similar to GP:9946904; identified by sequence similarity; putative.
       0.635
EF_1190
Conserved hypothetical protein; Identified by Glimmer2; putative.
       0.570
EF_1191
DegV family protein; Similar to GB:M13144, GB:M13981, GB:X04446, GB:X04445, SP:P05111, PID:1204105, PID:186413, PID:307068, and PID:490130; identified by sequence similarity; putative.
       0.566
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
  
   0.456
rnj
Metallo-beta-lactamase superfamily protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.432
EF_0049
Sigma-70 factor family protien; Similar to GP:10172727, GB:L04284, GB:D14540, GB:S66432, GB:L01986, GB:S78571, GB:U04737, SP:Q03164, PID:184394, PID:451555, PID:553800, and PID:899268; identified by sequence similarity; putative; Belongs to the sigma-70 factor family.
  
    0.425
EF_1689
Hypothetical protein; Identified by Glimmer2; putative.
   
    0.402
Your Current Organism:
Enterococcus faecalis V583
NCBI taxonomy Id: 226185
Other names: E. faecalis V583, Enterococcus faecalis str. V583, Enterococcus faecalis strain V583
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.