STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_0350Xylulose kinase (xylulokinase). (531 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.975
AraD
Putative sugar epimerase/aldolase.
 
  
 0.958
BT_0355
Na+/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.886
BT_0348
alpha-L-arabinofuranosidase.
 
  
 0.858
BT_0356
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
  
  
 0.820
BT_0347
Transketolase; Belongs to the transketolase family.
  
 
 0.788
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
 
 0.757
BT_0352
Conserved hypothetical protein; DEATH-like.
  
    0.716
BT_0349
Acetyl-CoA carboxylase, biotin carboxylase.
  
    0.710
BT_0354
NUDIX family hydrolase.
  
    0.599
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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