Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BT_3841 | def | BT_3841 | BT_0420 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.857 |
| BT_3841 | rplI | BT_3841 | BT_2161 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.913 |
| BT_3841 | rplQ | BT_3841 | BT_2700 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L17. | 0.889 |
| BT_3841 | rplS | BT_3841 | BT_2489 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.914 |
| BT_3841 | rplT | BT_3841 | BT_0425 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.794 |
| BT_3841 | rplU | BT_3841 | BT_4314 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.924 |
| BT_3841 | rplV | BT_3841 | BT_2722 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.925 |
| BT_3841 | rplX | BT_3841 | BT_2716 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.950 |
| BT_3841 | rpmI | BT_3841 | BT_0424 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.846 |
| BT_3841 | rpsT | BT_3841 | BT_3430 | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.846 |
| def | BT_3841 | BT_0420 | BT_3841 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | FKBP-type peptidyl-prolyl cis-transisomerase (trigger factor). | 0.857 |
| def | rplI | BT_0420 | BT_2161 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.871 |
| def | rplQ | BT_0420 | BT_2700 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L17. | 0.856 |
| def | rplS | BT_0420 | BT_2489 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.868 |
| def | rplT | BT_0420 | BT_0425 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.924 |
| def | rplU | BT_0420 | BT_4314 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.925 |
| def | rplV | BT_0420 | BT_2722 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.865 |
| def | rplX | BT_0420 | BT_2716 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.891 |
| def | rpmI | BT_0420 | BT_0424 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.858 |
| def | rpsT | BT_0420 | BT_3430 | Peptide deformylase(PDF); Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.864 |
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