STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaBAltronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily. (479 aa)    
Predicted Functional Partners:
uxaC
Uronate isomerase.
 
 
 0.994
BT_0486
Altronate hydrolase.
 
 0.986
BT_0824
Transcriptional regulator (LacI family).
 
  
 0.910
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.739
BT_2104
ROK family member transcriptional repressor; Mannose-6-phosphate isomerase-like.
  
  
 0.575
BT_0488
2-dehydro-3-deoxygluconokinase.
 
  
 0.571
BT_0489
Putative gluconate aldolase.
 
  
 0.544
BT_0487
Transcriptional regulator.
 
  
 0.533
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate; Belongs to the mannonate dehydratase family.
 
  
 0.526
BT_4187
exo-poly-alpha-D-galacturonosidase precursor; Belongs to the glycosyl hydrolase 28 family.
 
  
 0.503
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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