Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BT_0984 | BT_0986 | Conserved hypothetical protein. | Glycoside hydrolase family 2, sugar binding protein. | 0.976 |
BT_0984 | BT_0997 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.860 |
BT_0984 | BT_1001 | Conserved hypothetical protein. | Putative alpha-rhamnosidase. | 0.878 |
BT_0984 | BT_1002 | Conserved hypothetical protein. | Pectin lyase fold/virulence factor. | 0.858 |
BT_0984 | BT_1012 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.831 |
BT_0984 | BT_1017 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.853 |
BT_0984 | BT_1019 | Conserved hypothetical protein. | Glycoside hydrolase family 78. | 0.590 |
BT_0984 | BT_1020 | Conserved hypothetical protein. | Six-hairpin glycosidase. | 0.888 |
BT_0984 | BT_1021 | Conserved hypothetical protein. | Arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.819 |
BT_0984 | BT_1023 | Conserved hypothetical protein. | Putative pectate lyase. | 0.771 |
BT_0986 | BT_0984 | Glycoside hydrolase family 2, sugar binding protein. | Conserved hypothetical protein. | 0.976 |
BT_0986 | BT_0997 | Glycoside hydrolase family 2, sugar binding protein. | Conserved hypothetical protein. | 0.898 |
BT_0986 | BT_1001 | Glycoside hydrolase family 2, sugar binding protein. | Putative alpha-rhamnosidase. | 0.868 |
BT_0986 | BT_1002 | Glycoside hydrolase family 2, sugar binding protein. | Pectin lyase fold/virulence factor. | 0.874 |
BT_0986 | BT_1012 | Glycoside hydrolase family 2, sugar binding protein. | Conserved hypothetical protein. | 0.856 |
BT_0986 | BT_1017 | Glycoside hydrolase family 2, sugar binding protein. | Conserved hypothetical protein. | 0.796 |
BT_0986 | BT_1019 | Glycoside hydrolase family 2, sugar binding protein. | Glycoside hydrolase family 78. | 0.829 |
BT_0986 | BT_1020 | Glycoside hydrolase family 2, sugar binding protein. | Six-hairpin glycosidase. | 0.803 |
BT_0986 | BT_1021 | Glycoside hydrolase family 2, sugar binding protein. | Arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.842 |
BT_0986 | BT_1023 | Glycoside hydrolase family 2, sugar binding protein. | Putative pectate lyase. | 0.805 |
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