STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1062Putative lipoprotein. (317 aa)    
Predicted Functional Partners:
BT_1064
Rhodopsin-like GPCR superfamily.
  
  
 0.660
BT_1063
Putative lipoprotein.
  
  
 0.655
BT_1065
Hypothetical protein.
  
  
 0.623
BT_1066
Conserved hypothetical protein.
  
  
 0.614
BT_1068
Hypothetical protein.
  
  
 0.591
BT_1069
Conserved hypothetical protein, putative transcriptional regulator.
     
 0.504
BT_2549
Muramoyltetrapeptide carboxypeptidase-like.
      
 0.482
BT_4225
Conserved hypothetical protein.
     
 0.419
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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