STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_1274L-fuculose-1-phosphate aldolase. (212 aa)    
Predicted Functional Partners:
BT_1275
L-fuculose kinase.
 
 
 0.981
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
  
 0.904
BT_1277
L-fucose permease.
 
  
 0.895
BT_1276
Rhamnose mutarotase.
  
  
 0.857
rhaB
Rhamnulose kinase/L-fuculose kinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.
 
 
 0.802
BT_1272
FucR.
 
  
 0.608
BT_3616
Fucose permease.
  
  
 0.515
BT_3767
Lactaldehyde reductase.
  
  
 0.508
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
  
 0.504
rhaM
Rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
  
  
 0.465
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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