STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_2970alpha-L-fucosidase precursor. (484 aa)    
Predicted Functional Partners:
BT_2969
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 0.825
BT_2964
Chondroitinase AC precursor.
 
    0.591
BT_4160
Beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.508
BT_2192
Putative lipoprotein.
 
  
0.502
BT_2967
SusD homolog.
  
    0.502
BT_3155
Glycoside hydrolase family 95.
 
    0.486
BT_2968
SusC homolog.
  
    0.484
BT_3173
Glycoside hydrolase family 95.
  
    0.465
BT_0290
Beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.460
BT_1777
Glycoside hydrolase family 95.
  
    0.460
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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