STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_3675Endo-1,4-beta-xylanase D precursor; Belongs to the glycosyl hydrolase 43 family. (333 aa)    
Predicted Functional Partners:
BT_3655
Arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
 0.984
BT_3656
Putative beta-xylosidase.
 
 
  0.918
BT_3677
Conserved hypothetical protein.
 
  
 0.837
BT_3674
Six-hairpin glycosidase.
 
  
 0.829
BT_3685
Beta-glucanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.795
BT_3663
Putative beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.786
BT_0349
Acetyl-CoA carboxylase, biotin carboxylase.
  
 0.779
BT_3683
Beta-glucanase precursor.
 
  
 0.772
BT_0265
Beta-glucanase precursor; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.767
BT_0264
Glycoside hydrolase family 43; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.722
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.