STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_3687Glycosyl hydrolase, family 88. (381 aa)    
Predicted Functional Partners:
BT_3686
Neuraminidase.
    0.937
BT_3685
Beta-glucanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
    0.857
BT_1021
Arabinosidase; Belongs to the glycosyl hydrolase 43 family.
    0.689
BT_3655
Arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
    0.621
BT_4145
Glycoside hydrolase family 2, sugar binding protein.
 
    0.611
BT_4173
Putative rhamnogalacturonan acetylesterase.
 
    0.605
BT_3233
Galactose mutarotase-like protein.
    0.598
BT_4150
Putative rhamnogalacturonan acetylesterase.
 
    0.586
BT_3159
Conserved hypothetical protein.
  
     0.566
BT_3684
Hypothetical protein.
  
    0.561
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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