STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_3990Putative alpha-1,2-mannosidase. (755 aa)    
Predicted Functional Partners:
BT_3991
Putative alpha-1,2-mannosidase.
 
  
0.707
BT_3994
Putative alpha-1,2-mannosidase.
 
  
0.527
BT_3992
Putative anti-sigma factor; FrrF homolog.
  
    0.506
BT_2630
Conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain.
 
  
 0.494
BT_3989
Hypothetical protein.
  
    0.461
BT_3987
endo-beta-N-acetylglucosaminidase F1 precursor.
  
  
 0.460
BT_3783
Putative endonuclease/exonuclease/phosphatase family protein.
 
  
 0.457
BT_3986
Putative patatin-like protein.
  
  
 0.448
BT_2200
Conserved hypothetical protein.
  
  
 0.444
BT_3984
SusD homolog.
   
  
 0.433
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.