STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_4175Conserved hypothetical protein. (613 aa)    
Predicted Functional Partners:
BT_4176
Conserved hypothetical protein, putative cytoplasmic protein.
 
  
 0.964
BT_4150
Putative rhamnogalacturonan acetylesterase.
 
 0.902
BT_4173
Putative rhamnogalacturonan acetylesterase.
 
 
 0.892
BT_4170
Putative pectate lyase L precursor.
 
  
 0.852
BT_4183
Pectate lyase L precursor.
 
  
 0.839
rhaM
Rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
    0.838
BT_0348
alpha-L-arabinofuranosidase.
 
  
 0.794
BT_4172
Concanavalin A-like lectin/glucanase.
 
    0.785
BT_0369
Endo-1,4-beta-xylanase D precursor; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.778
BT_0367
Putative endo-arabinase; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.774
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.