STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glaBHypothetical protein; Alpha-galactosidase. Removes both branched alpha-1,3-linked galactose residues of blood group B antigens and linear alpha-1,3- linked galactose structures; Belongs to the glycosyl hydrolase 110 family. B subfamily. (615 aa)    
Predicted Functional Partners:
BT_4252
Putative oxidoreductase; Glycosidase; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.
 
    0.748
BT_4398
TPR domain-containing protein.
 
    0.539
BT_2851
Alpha-galactosidase (melibiase).
  
  
 0.520
BT_3133
Alpha-galactosidase.
 
   
 0.510
BT_2367
Acyltransferase.
  
  
 0.505
BT_3131
Alpha-galactosidase (melibiase).
  
   
 0.501
BT_1743
Hypothetical protein.
  
 
   0.495
BT_4078
Lipolytic enzyme, G-D-S-L family.
  
 
   0.493
BT_2621
Putative O-antigen related protein.
  
   0.478
BT_2751
Neuramindase-like protein.
  
    0.450
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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