STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BT_4690Alpha-amylase precursor. (481 aa)    
Predicted Functional Partners:
BT_4689
Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.971
BT_0771
1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II).
 
 
 0.951
BT_1100
Alpha-glucan phosphorylase.
 
 0.937
BT_1293
Alpha-glucan phosphorylase.
 
 0.936
BT_2146
4-alpha-glucanotransferase.
 
 
 0.934
susG
Alpha-amylase, susG; Alpha-amylase that cleaves starch into oligosaccharides before internalization for degradation, the first step in starch degradation.
 
  
  0.925
BT_4305
Putative alpha-amylase.
  
 
 0.912
susB
Alpha-glucosidase SusB; Glucoamylase that hydrolyzes alpha-1,4-glucosidic linkages, alpha-1,6-, alpha-1,3- and alpha-1,2-glucosidic linkages during starch degradation.
    
 0.901
BT_4581
Alpha-glucosidase.
  
 
 0.901
BT_2573
Glutamate/gamma-aminobutyrate anti-porter.
  
 0.705
Your Current Organism:
Bacteroides thetaiotaomicron
NCBI taxonomy Id: 226186
Other names: B. thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron VPI-5482, Bacteroides thetaiotaomicron str. VPI-5482, Bacteroides thetaiotaomicron strain VPI-5482
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