STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4936Urea transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (684 aa)    
Predicted Functional Partners:
CMQ_6384
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.781
CMQ_5062
Sugar-lactone oxidase.
    
 0.614
CMQ_4199
C6 zinc finger domain containing protein.
    
  0.580
CMQ_1168
C6 zinc finger domain containing protein.
    
  0.580
CMQ_171
C6 zinc finger domain containing protein.
    
  0.580
CMQ_6848
Tryptophan synthase.
     
 0.543
CMQ_5163
Tryptophan synthase.
     
 0.543
CMQ_7727
Acetoacetyl-synthase.
 
  
 0.541
CMQ_6959
Acetoacetyl-synthase.
 
  
 0.505
CMQ_2387
Acetylglutamate kinase.
     
 0.501
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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