STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6265Snf1 kinase complex beta-subunit. (546 aa)    
Predicted Functional Partners:
CMQ_5597
Non-specific serine/threonine protein kinase.
   
 0.987
CMQ_689
RhoGAP.
   
 0.978
CMQ_1743
Nuclear protein snf4.
   
 0.978
CMQ_3146
Uncharacterized protein.
    
 0.968
CMQ_4210
Serine/threonine-protein kinase.
    
 0.910
CMQ_3454
Non-specific serine/threonine protein kinase.
    
 0.908
CMQ_179
Serine/threonine-protein kinase.
    
 0.908
CMQ_244
Cbs domain containing protein.
   
 0.874
CMQ_3085
Calcium calmodulin-dependent protein kinase.
    
 0.869
CMQ_5445
Cbs and pb1 domain containing protein.
   
 0.861
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.