Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BC_0113 | BC_0114 | BC_0113 | BC_0114 | Hypothetical Cytosolic Protein. | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | 0.813 |
| BC_0113 | BC_3897 | BC_0113 | BC_3897 | Hypothetical Cytosolic Protein. | RNA binding protein. | 0.661 |
| BC_0113 | BC_4562 | BC_0113 | BC_4562 | Hypothetical Cytosolic Protein. | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.583 |
| BC_0113 | cysE | BC_0113 | BC_0109 | Hypothetical Cytosolic Protein. | Serine acetyltransferase. | 0.848 |
| BC_0113 | cysS | BC_0113 | BC_0110 | Hypothetical Cytosolic Protein. | Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.954 |
| BC_0113 | mrnC | BC_0113 | BC_0111 | Hypothetical Cytosolic Protein. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.974 |
| BC_0113 | rlmB | BC_0113 | BC_0112 | Hypothetical Cytosolic Protein. | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.984 |
| BC_0114 | BC_0113 | BC_0114 | BC_0113 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | Hypothetical Cytosolic Protein. | 0.813 |
| BC_0114 | cysE | BC_0114 | BC_0109 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | Serine acetyltransferase. | 0.639 |
| BC_0114 | cysS | BC_0114 | BC_0110 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.680 |
| BC_0114 | mrnC | BC_0114 | BC_0111 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.785 |
| BC_0114 | rlmB | BC_0114 | BC_0112 | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.728 |
| BC_3897 | BC_0113 | BC_3897 | BC_0113 | RNA binding protein. | Hypothetical Cytosolic Protein. | 0.661 |
| BC_3897 | mrnC | BC_3897 | BC_0111 | RNA binding protein. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.785 |
| BC_3897 | rplC | BC_3897 | BC_0131 | RNA binding protein. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.512 |
| BC_4562 | BC_0113 | BC_4562 | BC_0113 | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical Cytosolic Protein. | 0.583 |
| BC_4562 | cysS | BC_4562 | BC_0110 | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.596 |
| BC_4562 | mrnC | BC_4562 | BC_0111 | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.694 |
| BC_4562 | rplC | BC_4562 | BC_0131 | 23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.804 |
| cysE | BC_0113 | BC_0109 | BC_0113 | Serine acetyltransferase. | Hypothetical Cytosolic Protein. | 0.848 |
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