Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_2234 | arcA | BC_2234 | BC_0406 | Arginine/ornithine antiporter. | Arginine deiminase. | 0.924 |
BC_2234 | arcB | BC_2234 | BC_0407 | Arginine/ornithine antiporter. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.760 |
BC_2234 | arcC | BC_2234 | BC_0409 | Arginine/ornithine antiporter. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.820 |
BC_2234 | argF | BC_2234 | BC_4126 | Arginine/ornithine antiporter. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.630 |
BC_2248 | arcA | BC_2248 | BC_0406 | Acetylornithine deacetylase. | Arginine deiminase. | 0.916 |
BC_2248 | arcB | BC_2248 | BC_0407 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.959 |
BC_2248 | argF | BC_2248 | BC_4126 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.959 |
BC_2248 | argG | BC_2248 | BC_4630 | Acetylornithine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.976 |
BC_2248 | argH | BC_2248 | BC_3550 | Acetylornithine deacetylase. | Argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. | 0.827 |
BC_2248 | argH-2 | BC_2248 | BC_4629 | Acetylornithine deacetylase. | Argininosuccinate lyase. | 0.795 |
BC_2248 | rocF | BC_2248 | BC_0185 | Acetylornithine deacetylase. | Arginase; Belongs to the arginase family. | 0.914 |
arcA | BC_2234 | BC_0406 | BC_2234 | Arginine deiminase. | Arginine/ornithine antiporter. | 0.924 |
arcA | BC_2248 | BC_0406 | BC_2248 | Arginine deiminase. | Acetylornithine deacetylase. | 0.916 |
arcA | arcB | BC_0406 | BC_0407 | Arginine deiminase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.999 |
arcA | arcC | BC_0406 | BC_0409 | Arginine deiminase. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.999 |
arcA | arcD | BC_0406 | BC_0408 | Arginine deiminase. | Arginine/ornithine antiporter. | 0.996 |
arcA | argF | BC_0406 | BC_4126 | Arginine deiminase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.990 |
arcA | argG | BC_0406 | BC_4630 | Arginine deiminase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.920 |
arcA | argH | BC_0406 | BC_3550 | Arginine deiminase. | Argininosuccinate lyase; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. | 0.946 |
arcA | argH-2 | BC_0406 | BC_4629 | Arginine deiminase. | Argininosuccinate lyase. | 0.943 |
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