STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldh1L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (314 aa)    
Predicted Functional Partners:
BC_3774
Pyruvate synthase alpha chain.
  
 
 0.972
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.969
BC_1546
Aspartate aminotransferase.
  
 0.965
BC_4604
NAD-dependent malic enzyme.
  
 0.953
BC_3323
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.952
BC_3972
Pyruvate dehydrogenase E1 component beta subunit.
   
 0.947
BC_3773
Pyruvate synthase subunit porB.
  
 
 0.937
BC_2328
Pyruvate oxidase; Belongs to the TPP enzyme family.
  
 0.936
pflB
Formate acetyltransferase.
     
 0.932
pyc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.928
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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