Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_2629 | BC_2786 | BC_2629 | BC_2786 | Methionyl-tRNA formyltransferase. | Hypothetical protein. | 0.682 |
BC_2629 | fmt | BC_2629 | BC_3864 | Methionyl-tRNA formyltransferase. | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.928 |
BC_2629 | rsmB | BC_2629 | BC_3863 | Methionyl-tRNA formyltransferase. | 16S rRNA m(5)C 967 methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.959 |
BC_2784 | BC_2785 | BC_2784 | BC_2785 | Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.855 |
BC_2784 | BC_2786 | BC_2784 | BC_2786 | Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.589 |
BC_2784 | BC_2787 | BC_2784 | BC_2787 | Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family. | HIT family hydrolase. | 0.612 |
BC_2784 | BC_2788 | BC_2784 | BC_2788 | Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.404 |
BC_2785 | BC_2784 | BC_2785 | BC_2784 | Hypothetical protein. | Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family. | 0.855 |
BC_2785 | BC_2786 | BC_2785 | BC_2786 | Hypothetical protein. | Hypothetical protein. | 0.640 |
BC_2785 | BC_2787 | BC_2785 | BC_2787 | Hypothetical protein. | HIT family hydrolase. | 0.592 |
BC_2785 | BC_2788 | BC_2785 | BC_2788 | Hypothetical protein. | Hypothetical protein. | 0.414 |
BC_2786 | BC_2629 | BC_2786 | BC_2629 | Hypothetical protein. | Methionyl-tRNA formyltransferase. | 0.682 |
BC_2786 | BC_2784 | BC_2786 | BC_2784 | Hypothetical protein. | Phosphohydrolase (MutT/nudix family protein); Belongs to the Nudix hydrolase family. | 0.589 |
BC_2786 | BC_2785 | BC_2786 | BC_2785 | Hypothetical protein. | Hypothetical protein. | 0.640 |
BC_2786 | BC_2787 | BC_2786 | BC_2787 | Hypothetical protein. | HIT family hydrolase. | 0.849 |
BC_2786 | BC_2788 | BC_2786 | BC_2788 | Hypothetical protein. | Hypothetical protein. | 0.559 |
BC_2786 | BC_5155 | BC_2786 | BC_5155 | Hypothetical protein. | Hypothetical Cytosolic Protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.557 |
BC_2786 | dnaJ | BC_2786 | BC_4311 | Hypothetical protein. | Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.556 |
BC_2786 | fmt | BC_2786 | BC_3864 | Hypothetical protein. | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.682 |
BC_2786 | pknB | BC_2786 | BC_3860 | Hypothetical protein. | Serine/threonine protein kinase. | 0.936 |
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