STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_3163Transcriptional regulator, TetR family. (192 aa)    
Predicted Functional Partners:
BC_3162
Bicyclomycin resistance protein.
 
     0.672
BC_5000
Transcriptional regulator, TetR family.
  
    0.567
BC_4005
DNA-entry nuclease.
  
     0.499
BC_2518
Methyltransferase.
  
 
   0.473
BC_1792
Hypothetical protein.
  
     0.446
BC_2622
Macrolide glycosyltransferase.
  
     0.446
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.