Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_2134 | BC_4472 | BC_2134 | BC_4472 | Uroporphyrin-III C-methyltransferase. | HEMX protein. | 0.408 |
BC_2134 | cobA | BC_2134 | BC_1426 | Uroporphyrin-III C-methyltransferase. | Uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.903 |
BC_2134 | hemA | BC_2134 | BC_4473 | Uroporphyrin-III C-methyltransferase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.819 |
BC_2134 | hemB | BC_2134 | BC_4469 | Uroporphyrin-III C-methyltransferase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.895 |
BC_2134 | hemC | BC_2134 | BC_4471 | Uroporphyrin-III C-methyltransferase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.996 |
BC_2134 | hemD | BC_2134 | BC_4470 | Uroporphyrin-III C-methyltransferase. | Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.977 |
BC_2134 | hemE | BC_2134 | BC_1068 | Uroporphyrin-III C-methyltransferase. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.926 |
BC_2134 | hemL1 | BC_2134 | BC_0512 | Uroporphyrin-III C-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.666 |
BC_2134 | hemL2 | BC_2134 | BC_4468 | Uroporphyrin-III C-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.711 |
BC_4472 | BC_2134 | BC_4472 | BC_2134 | HEMX protein. | Uroporphyrin-III C-methyltransferase. | 0.408 |
BC_4472 | cobA | BC_4472 | BC_1426 | HEMX protein. | Uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.407 |
BC_4472 | hemA | BC_4472 | BC_4473 | HEMX protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.926 |
BC_4472 | hemB | BC_4472 | BC_4469 | HEMX protein. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.866 |
BC_4472 | hemC | BC_4472 | BC_4471 | HEMX protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.919 |
BC_4472 | hemD | BC_4472 | BC_4470 | HEMX protein. | Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.956 |
BC_4472 | hemE | BC_4472 | BC_1068 | HEMX protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.432 |
BC_4472 | hemL2 | BC_4472 | BC_4468 | HEMX protein. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.815 |
cobA | BC_2134 | BC_1426 | BC_2134 | Uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Uroporphyrin-III C-methyltransferase. | 0.903 |
cobA | BC_4472 | BC_1426 | BC_4472 | Uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | HEMX protein. | 0.407 |
cobA | hemA | BC_1426 | BC_4473 | Uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.806 |
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