Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BC_1711 | BC_2516 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase. | 0.715 |
BC_1711 | BC_4017 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.578 |
BC_1711 | BC_5079 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase. | 0.747 |
BC_2516 | BC_1711 | Short chain dehydrogenase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.715 |
BC_2516 | BC_4017 | Short chain dehydrogenase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.630 |
BC_2516 | BC_5076 | Short chain dehydrogenase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.665 |
BC_2516 | BC_5079 | Short chain dehydrogenase. | Short chain dehydrogenase. | 0.654 |
BC_4017 | BC_1711 | 3-oxoacyl-[acyl-carrier protein] reductase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.578 |
BC_4017 | BC_2516 | 3-oxoacyl-[acyl-carrier protein] reductase. | Short chain dehydrogenase. | 0.630 |
BC_4017 | BC_5079 | 3-oxoacyl-[acyl-carrier protein] reductase. | Short chain dehydrogenase. | 0.707 |
BC_5076 | BC_2516 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase. | 0.665 |
BC_5076 | BC_5079 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase. | 0.868 |
BC_5076 | BC_5080 | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Methyltransferase. | 0.403 |
BC_5079 | BC_1711 | Short chain dehydrogenase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.747 |
BC_5079 | BC_2516 | Short chain dehydrogenase. | Short chain dehydrogenase. | 0.654 |
BC_5079 | BC_4017 | Short chain dehydrogenase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.707 |
BC_5079 | BC_5076 | Short chain dehydrogenase. | Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.868 |
BC_5079 | BC_5080 | Short chain dehydrogenase. | Methyltransferase. | 0.965 |
BC_5079 | BC_5081 | Short chain dehydrogenase. | NADH oxidase (NOXASE). | 0.799 |
BC_5079 | BC_5082 | Short chain dehydrogenase. | Hypothetical protein. | 0.914 |
page 1 of 3