STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_5084Lanthionine biosynthesis protein. (871 aa)    
Predicted Functional Partners:
BC_5083
Lantibiotic biosynthesis protein.
 
    0.991
BC_5085
Hypothetical Cytosolic Protein.
 
    0.966
BC_5080
Methyltransferase.
 
    0.932
BC_5079
Short chain dehydrogenase.
  
    0.903
BC_5081
NADH oxidase (NOXASE).
 
    0.875
BC_5082
Hypothetical protein.
  
    0.873
BC_5086
Putative lantibiotic biosynthesis protein.
  
    0.805
BC_3366
Oxetanocin A resistance protein.
   
  
 0.777
BC_2442
Transcriptional regulator, LuxR family.
  
     0.713
BC_5122
Hypothetical Cytosolic Protein.
 
     0.663
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.