Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_1625 | BC_1628 | BC_1625 | BC_1628 | Chemotaxis motA protein. | Chemotaxis protein cheA. | 0.962 |
BC_1625 | BC_1632 | BC_1625 | BC_1632 | Chemotaxis motA protein. | Chemotaxis protein methyltransferase. | 0.894 |
BC_1625 | BC_1654 | BC_1625 | BC_1654 | Chemotaxis motA protein. | Chemotaxis protein cheV. | 0.984 |
BC_1625 | BC_5424 | BC_1625 | BC_5424 | Chemotaxis motA protein. | Methyl-accepting chemotaxis protein. | 0.876 |
BC_1625 | flgC | BC_1625 | BC_1642 | Chemotaxis motA protein. | Flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family. | 0.989 |
BC_1625 | flgG | BC_1625 | BC_1671 | Chemotaxis motA protein. | Flagellar basal-body rod protein flgG. | 0.985 |
BC_1625 | flgK | BC_1625 | BC_1636 | Chemotaxis motA protein. | Flagellar hook-associated protein 1. | 0.982 |
BC_1625 | fliG | BC_1625 | BC_1645 | Chemotaxis motA protein. | Flagellar motor switch protein fliG. | 0.977 |
BC_1625 | fliI | BC_1625 | BC_1647 | Chemotaxis motA protein. | Flagellum-specific ATP synthase. | 0.949 |
BC_1625 | motA | BC_1625 | BC_4513 | Chemotaxis motA protein. | Chemotaxis motA protein. | 0.955 |
BC_1628 | BC_1625 | BC_1628 | BC_1625 | Chemotaxis protein cheA. | Chemotaxis motA protein. | 0.962 |
BC_1628 | BC_1632 | BC_1628 | BC_1632 | Chemotaxis protein cheA. | Chemotaxis protein methyltransferase. | 0.951 |
BC_1628 | BC_1654 | BC_1628 | BC_1654 | Chemotaxis protein cheA. | Chemotaxis protein cheV. | 0.999 |
BC_1628 | BC_5424 | BC_1628 | BC_5424 | Chemotaxis protein cheA. | Methyl-accepting chemotaxis protein. | 0.965 |
BC_1628 | flgC | BC_1628 | BC_1642 | Chemotaxis protein cheA. | Flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family. | 0.980 |
BC_1628 | flgG | BC_1628 | BC_1671 | Chemotaxis protein cheA. | Flagellar basal-body rod protein flgG. | 0.966 |
BC_1628 | flgK | BC_1628 | BC_1636 | Chemotaxis protein cheA. | Flagellar hook-associated protein 1. | 0.978 |
BC_1628 | fliG | BC_1628 | BC_1645 | Chemotaxis protein cheA. | Flagellar motor switch protein fliG. | 0.979 |
BC_1628 | fliI | BC_1628 | BC_1647 | Chemotaxis protein cheA. | Flagellum-specific ATP synthase. | 0.982 |
BC_1628 | motA | BC_1628 | BC_4513 | Chemotaxis protein cheA. | Chemotaxis motA protein. | 0.947 |
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