Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_2306 | BC_2307 | BC_2306 | BC_2307 | Glycine-AMP ligase. | Glycine-AMP ligase. | 0.991 |
BC_2306 | BC_2453 | BC_2306 | BC_2453 | Glycine-AMP ligase. | Peptide synthetase. | 0.985 |
BC_2306 | BC_2454 | BC_2306 | BC_2454 | Glycine-AMP ligase. | Peptide synthetase. | 0.987 |
BC_2306 | BC_2456 | BC_2306 | BC_2456 | Glycine-AMP ligase. | Peptide synthetase. | 0.999 |
BC_2306 | BC_4061 | BC_2306 | BC_4061 | Glycine-AMP ligase. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.540 |
BC_2306 | BC_5004 | BC_2306 | BC_5004 | Glycine-AMP ligase. | Enoyl-CoA hydratase. | 0.565 |
BC_2306 | menE | BC_2306 | BC_4851 | Glycine-AMP ligase. | O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily. | 0.866 |
BC_2307 | BC_2306 | BC_2307 | BC_2306 | Glycine-AMP ligase. | Glycine-AMP ligase. | 0.991 |
BC_2307 | BC_2453 | BC_2307 | BC_2453 | Glycine-AMP ligase. | Peptide synthetase. | 0.984 |
BC_2307 | BC_2454 | BC_2307 | BC_2454 | Glycine-AMP ligase. | Peptide synthetase. | 0.999 |
BC_2307 | BC_2456 | BC_2307 | BC_2456 | Glycine-AMP ligase. | Peptide synthetase. | 0.999 |
BC_2307 | BC_4061 | BC_2307 | BC_4061 | Glycine-AMP ligase. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.540 |
BC_2307 | BC_5004 | BC_2307 | BC_5004 | Glycine-AMP ligase. | Enoyl-CoA hydratase. | 0.565 |
BC_2307 | menE | BC_2307 | BC_4851 | Glycine-AMP ligase. | O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily. | 0.868 |
BC_2453 | BC_2306 | BC_2453 | BC_2306 | Peptide synthetase. | Glycine-AMP ligase. | 0.985 |
BC_2453 | BC_2307 | BC_2453 | BC_2307 | Peptide synthetase. | Glycine-AMP ligase. | 0.984 |
BC_2453 | BC_2454 | BC_2453 | BC_2454 | Peptide synthetase. | Peptide synthetase. | 0.988 |
BC_2453 | BC_2456 | BC_2453 | BC_2456 | Peptide synthetase. | Peptide synthetase. | 0.987 |
BC_2453 | BC_4061 | BC_2453 | BC_4061 | Peptide synthetase. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.539 |
BC_2453 | BC_5004 | BC_2453 | BC_5004 | Peptide synthetase. | Enoyl-CoA hydratase. | 0.545 |
page 1 of 4