Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0038 | CBU_1514 | CBU_0038 | CBU_1514 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | Hypothetical protein. | 0.912 |
CBU_0038 | CBU_1928 | CBU_0038 | CBU_1928 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | acyl-CoA synthetase. | 0.639 |
CBU_0038 | fabD | CBU_0038 | CBU_0494 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.988 |
CBU_0038 | fabF | CBU_0038 | CBU_0497 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | 3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis (By similarity). | 0.991 |
CBU_0038 | fabG | CBU_0038 | CBU_0495 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.931 |
CBU_0038 | fabH | CBU_0038 | CBU_0493 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.928 |
CBU_0038 | fabZ | CBU_0038 | CBU_0614 | 3-oxoacyl-[acyl-carrier-protein] synthase III. | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.887 |
CBU_0324 | CBU_1928 | CBU_0324 | CBU_1928 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.778 |
CBU_0324 | acpP | CBU_0324 | CBU_0496 | acyl-CoA synthetase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.566 |
CBU_0324 | fabD | CBU_0324 | CBU_0494 | acyl-CoA synthetase. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.912 |
CBU_0324 | fabF | CBU_0324 | CBU_0497 | acyl-CoA synthetase. | 3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis (By similarity). | 0.912 |
CBU_1514 | CBU_0038 | CBU_1514 | CBU_0038 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase III. | 0.912 |
CBU_1514 | CBU_1928 | CBU_1514 | CBU_1928 | Hypothetical protein. | acyl-CoA synthetase. | 0.666 |
CBU_1514 | fabD | CBU_1514 | CBU_0494 | Hypothetical protein. | malonyl-CoA-[acyl-carrier-protein] transacylase. | 0.956 |
CBU_1514 | fabF | CBU_1514 | CBU_0497 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis (By similarity). | 0.942 |
CBU_1514 | fabG | CBU_1514 | CBU_0495 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.914 |
CBU_1514 | fabH | CBU_1514 | CBU_0493 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.912 |
CBU_1514 | fabZ | CBU_1514 | CBU_0614 | Hypothetical protein. | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.927 |
CBU_1928 | CBU_0038 | CBU_1928 | CBU_0038 | acyl-CoA synthetase. | 3-oxoacyl-[acyl-carrier-protein] synthase III. | 0.639 |
CBU_1928 | CBU_0324 | CBU_1928 | CBU_0324 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.778 |
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