STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBU_0572Cytosol aminopeptidase; Belongs to the peptidase M17 family. (458 aa)    
Predicted Functional Partners:
pepN
Membrane alanine aminopeptidase.
  
 0.947
gshB
Glutathione synthetase.
   
 
 0.934
CBU_1874
Glutamate--cysteine ligase.
    
 0.901
CBU_2024
Cystathionine beta-synthase.
    
 0.829
aspB
Succinyldiaminopimelate aminotransferase.
   
  0.821
metC
Cystathionine gamma-lyase; Catalyzes the cleavage of cystathionine to homocysteine, pyruvate and ammonia during methionine biosynthesis. Belongs to the trans-sulfuration enzymes family.
     
  0.800
CBU_0573
acyl-CoA dehydrogenase, long-chain specific.
   
   0.765
nagZ
Anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase.
    
 0.720
gidB
Methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
      0.601
sppA
Signal peptide peptidase.
      
 0.601
Your Current Organism:
Coxiella burnetii
NCBI taxonomy Id: 227377
Other names: C. burnetii RSA 493, Coxiella burnetii RSA 493, Coxiella burnetii str. RSA 493
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.