Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0994 | CBU_0995 | CBU_0994 | CBU_0995 | Hypothetical protein. | Cytochrome c oxidase polypeptide II. | 0.528 |
CBU_0994 | CBU_0997 | CBU_0994 | CBU_0997 | Hypothetical protein. | Hypothetical protein. | 0.525 |
CBU_0994 | ctaB | CBU_0994 | CBU_0996 | Hypothetical protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.528 |
CBU_0995 | CBU_0994 | CBU_0995 | CBU_0994 | Cytochrome c oxidase polypeptide II. | Hypothetical protein. | 0.528 |
CBU_0995 | CBU_0997 | CBU_0995 | CBU_0997 | Cytochrome c oxidase polypeptide II. | Hypothetical protein. | 0.768 |
CBU_0995 | ctaB | CBU_0995 | CBU_0996 | Cytochrome c oxidase polypeptide II. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.998 |
CBU_0995 | cyoA | CBU_0995 | CBU_1040 | Cytochrome c oxidase polypeptide II. | Cytochrome c oxidase polypeptide II. | 0.900 |
CBU_0995 | cyoB | CBU_0995 | CBU_1039 | Cytochrome c oxidase polypeptide II. | Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. | 0.998 |
CBU_0995 | cyoC | CBU_0995 | CBU_1038 | Cytochrome c oxidase polypeptide II. | Cytochrome c oxidase polypeptide III. | 0.998 |
CBU_0995 | cyoD | CBU_0995 | CBU_1035d | Cytochrome c oxidase polypeptide II. | Cytochrome O ubiquinol oxidase protein. | 0.992 |
CBU_0997 | CBU_0994 | CBU_0997 | CBU_0994 | Hypothetical protein. | Hypothetical protein. | 0.525 |
CBU_0997 | CBU_0995 | CBU_0997 | CBU_0995 | Hypothetical protein. | Cytochrome c oxidase polypeptide II. | 0.768 |
CBU_0997 | ctaB | CBU_0997 | CBU_0996 | Hypothetical protein. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.768 |
ctaB | CBU_0994 | CBU_0996 | CBU_0994 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Hypothetical protein. | 0.528 |
ctaB | CBU_0995 | CBU_0996 | CBU_0995 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase polypeptide II. | 0.998 |
ctaB | CBU_0997 | CBU_0996 | CBU_0997 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Hypothetical protein. | 0.768 |
ctaB | cyoA | CBU_0996 | CBU_1040 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase polypeptide II. | 0.978 |
ctaB | cyoB | CBU_0996 | CBU_1039 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family. | 0.997 |
ctaB | cyoC | CBU_0996 | CBU_1038 | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome c oxidase polypeptide III. | 0.992 |
ctaB | cyoD | CBU_0996 | CBU_1035d | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome O ubiquinol oxidase protein. | 0.978 |
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