node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplF | rplI | CBU_0253 | CBU_0867 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | 0.992 |
rplF | rplJ | CBU_0253 | CBU_0228 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.997 |
rplF | rplM | CBU_0253 | CBU_1749 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
rplF | rplO | CBU_0253 | CBU_0257 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplF | rplT | CBU_0253 | CBU_1323 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.990 |
rplF | rplU | CBU_0253 | CBU_0385 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.991 |
rplF | rpsB | CBU_0253 | CBU_1386 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.992 |
rplF | rpsD | CBU_0253 | CBU_0262 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.994 |
rplF | rpsG | CBU_0253 | CBU_0234 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.991 |
rplF | rpsI | CBU_0253 | CBU_1748 | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.992 |
rplI | rplF | CBU_0867 | CBU_0253 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.992 |
rplI | rplJ | CBU_0867 | CBU_0228 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.989 |
rplI | rplM | CBU_0867 | CBU_1749 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.992 |
rplI | rplO | CBU_0867 | CBU_0257 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.989 |
rplI | rplT | CBU_0867 | CBU_1323 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.992 |
rplI | rplU | CBU_0867 | CBU_0385 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.991 |
rplI | rpsB | CBU_0867 | CBU_1386 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.988 |
rplI | rpsD | CBU_0867 | CBU_0262 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.990 |
rplI | rpsG | CBU_0867 | CBU_0234 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.987 |
rplI | rpsI | CBU_0867 | CBU_1748 | LSU ribosomal protein L9P; Binds to the 23S rRNA; Belongs to the bacterial ribosomal protein bL9 family. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.992 |