Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0574 | CBU_0638 | CBU_0574 | CBU_0638 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.905 |
CBU_0574 | CBU_0974 | CBU_0574 | CBU_0974 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.919 |
CBU_0574 | gltA | CBU_0574 | CBU_1410 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Citrate synthase. | 0.928 |
CBU_0574 | pdhC | CBU_0574 | CBU_0462 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.905 |
CBU_0638 | CBU_0574 | CBU_0638 | CBU_0574 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.905 |
CBU_0638 | CBU_0974 | CBU_0638 | CBU_0974 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.905 |
CBU_0638 | gltA | CBU_0638 | CBU_1410 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Citrate synthase. | 0.951 |
CBU_0638 | pckA | CBU_0638 | CBU_2092 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. | 0.894 |
CBU_0638 | pdhC | CBU_0638 | CBU_0462 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.925 |
CBU_0974 | CBU_0574 | CBU_0974 | CBU_0574 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.919 |
CBU_0974 | CBU_0638 | CBU_0974 | CBU_0638 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.905 |
CBU_0974 | gltA | CBU_0974 | CBU_1410 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Citrate synthase. | 0.928 |
CBU_0974 | pdhC | CBU_0974 | CBU_0462 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.905 |
CBU_1204 | fumC | CBU_1204 | CBU_1096 | Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.851 |
CBU_1204 | gltA | CBU_1204 | CBU_1410 | Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family. | Citrate synthase. | 0.872 |
CBU_1204 | mdh | CBU_1204 | CBU_1241 | Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.833 |
CBU_1204 | pckA | CBU_1204 | CBU_2092 | Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. | 0.897 |
acnA | fumC | CBU_1720 | CBU_1096 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.647 |
acnA | gltA | CBU_1720 | CBU_1410 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Citrate synthase. | 0.987 |
acnA | mdh | CBU_1720 | CBU_1241 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.691 |
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