node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBU_0490 | CBU_1934 | CBU_0490 | CBU_1934 | DNA Polymerase X family. | ATP-dependent DNA ligase. | 0.910 |
CBU_0490 | dnaN | CBU_0490 | CBU_0002 | DNA Polymerase X family. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.714 |
CBU_0490 | polI | CBU_0490 | CBU_1795 | DNA Polymerase X family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.935 |
CBU_0490 | xth | CBU_0490 | CBU_0297 | DNA Polymerase X family. | Exodeoxyribonuclease III. | 0.837 |
CBU_1932 | CBU_1934 | CBU_1932 | CBU_1934 | Hypothetical protein. | ATP-dependent DNA ligase. | 0.805 |
CBU_1932 | ku | CBU_1932 | CBU_1933 | Hypothetical protein. | Hypothetical DNA-binding protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.746 |
CBU_1934 | CBU_0490 | CBU_1934 | CBU_0490 | ATP-dependent DNA ligase. | DNA Polymerase X family. | 0.910 |
CBU_1934 | CBU_1932 | CBU_1934 | CBU_1932 | ATP-dependent DNA ligase. | Hypothetical protein. | 0.805 |
CBU_1934 | dnaN | CBU_1934 | CBU_0002 | ATP-dependent DNA ligase. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.988 |
CBU_1934 | holB | CBU_1934 | CBU_0500 | ATP-dependent DNA ligase. | DNA polymerase III, delta' subunit. | 0.869 |
CBU_1934 | ku | CBU_1934 | CBU_1933 | ATP-dependent DNA ligase. | Hypothetical DNA-binding protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.982 |
CBU_1934 | ligA | CBU_1934 | CBU_0542 | ATP-dependent DNA ligase. | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.716 |
CBU_1934 | polI | CBU_1934 | CBU_1795 | ATP-dependent DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.941 |
CBU_1934 | rpoA | CBU_1934 | CBU_0263 | ATP-dependent DNA ligase. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.657 |
CBU_1934 | rpoB | CBU_1934 | CBU_0231 | ATP-dependent DNA ligase. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.662 |
CBU_1934 | xth | CBU_1934 | CBU_0297 | ATP-dependent DNA ligase. | Exodeoxyribonuclease III. | 0.903 |
dnaN | CBU_0490 | CBU_0002 | CBU_0490 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA Polymerase X family. | 0.714 |
dnaN | CBU_1934 | CBU_0002 | CBU_1934 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | ATP-dependent DNA ligase. | 0.988 |
dnaN | holB | CBU_0002 | CBU_0500 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III, delta' subunit. | 0.998 |
dnaN | polI | CBU_0002 | CBU_1795 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |