STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gloBPutative hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (256 aa)    
Predicted Functional Partners:
HNE_3387
Putative lactoylglutathione lyase; Identified by match to protein family HMM PF00903.
 
  
 0.962
HNE_3405
Conserved hypothetical protein; Identified by similarity to GB:AAK22505.1; match to protein family HMM PF06172.
      0.936
HNE_0649
Metallo-beta-lactamase superfamily; Identified by match to protein family HMM PF00753.
  
  
0.907
dld
D-lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate.
    
 0.905
HNE_3407
Conserved hypothetical protein; Identified by similarity to GB:AAN30876.1.
     
 0.698
HNE_1949
Glutaredoxin homolog; Identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; Belongs to the glutaredoxin family. Monothiol subfamily.
 
  
 0.600
HNE_2480
Putative sulfide dehydrogenase, flavoprotein subunit; Identified by similarity to SP:Q06530; match to protein family HMM PF07992; match to protein family HMM TIGR01409.
   
 0.473
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
   
 0.472
HNE_3408
Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family.
       0.441
ubiG
Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
     0.431
Your Current Organism:
Hyphomonas neptunium
NCBI taxonomy Id: 228405
Other names: H. neptunium ATCC 15444, Hyphomonas neptunium ATCC 15444, Hyphomonas neptunium str. ATCC 15444, Hyphomonas neptunium strain ATCC 15444
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