Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NE0240 | NE0241 | NE0240 | NE0241 | Hypothetical protein; InterPro IPR000463:IPR001687 COGs COG0790. | Hypothetical protein. | 0.478 |
NE0241 | NE0240 | NE0241 | NE0240 | Hypothetical protein. | Hypothetical protein; InterPro IPR000463:IPR001687 COGs COG0790. | 0.478 |
NE0241 | NE0242 | NE0241 | NE0242 | Hypothetical protein. | Hypothetical protein. | 0.468 |
NE0241 | recA | NE0241 | NE1932 | Hypothetical protein. | RecA bacterial DNA recombination protein:AAA ATPase superfamily; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.686 |
NE0241 | thrC | NE0241 | NE2370 | Hypothetical protein. | thrC; probable threonine synthase protein. | 0.676 |
NE0242 | NE0241 | NE0242 | NE0241 | Hypothetical protein. | Hypothetical protein. | 0.468 |
recA | NE0241 | NE1932 | NE0241 | RecA bacterial DNA recombination protein:AAA ATPase superfamily; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.686 |
recA | thrC | NE1932 | NE2370 | RecA bacterial DNA recombination protein:AAA ATPase superfamily; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | thrC; probable threonine synthase protein. | 0.623 |
thrC | NE0241 | NE2370 | NE0241 | thrC; probable threonine synthase protein. | Hypothetical protein. | 0.676 |
thrC | recA | NE2370 | NE1932 | thrC; probable threonine synthase protein. | RecA bacterial DNA recombination protein:AAA ATPase superfamily; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.623 |