STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NE0264Conserved hypothetical protein. (170 aa)    
Predicted Functional Partners:
NE0263
Bacterial regulatory proteins, ArsR family.
 
  
 0.946
NE0266
Conserved hypothetical protein.
    0.834
NE0265
Hypothetical protein.
  
    0.743
NE0267
Conserved hypothetical protein.
 
     0.628
NE0446
Conserved hypothetical protein.
    0.506
NE0261
Putative plasmid stabilization element ParE; Belongs to the RelE toxin family.
       0.444
NE0262
Conserved hypothetical protein; InterPro IPR005360 COGs COG3609.
       0.444
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.