Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALOX5 | Heph,sla | NE1239 | NE1543 | Lipoxygenase. | Multicopper oxidase type 1. | 0.731 |
ALOX5 | NE0187 | NE1239 | NE0187 | Lipoxygenase. | Hypothetical protein. | 0.767 |
ALOX5 | NE1059 | NE1239 | NE1059 | Lipoxygenase. | Putative urea transporter. | 0.600 |
ALOX5 | NE1238 | NE1239 | NE1238 | Lipoxygenase. | Putative oxygenase. | 0.624 |
ALOX5 | NE1241 | NE1239 | NE1241 | Lipoxygenase. | Tyrosinase. | 0.873 |
ALOX5 | NE1244 | NE1239 | NE1244 | Lipoxygenase. | Hypothetical protein. | 0.559 |
ALOX5 | Ptgs1 | NE1239 | NE1240 | Lipoxygenase. | Putative cyclooxygenase-2. | 0.994 |
ALOX5 | Rh50 | NE1239 | NE0448 | Lipoxygenase. | Ammonium transporter family. | 0.595 |
Heph,sla | ALOX5 | NE1543 | NE1239 | Multicopper oxidase type 1. | Lipoxygenase. | 0.731 |
Heph,sla | NE0187 | NE1543 | NE0187 | Multicopper oxidase type 1. | Hypothetical protein. | 0.743 |
Heph,sla | NE1059 | NE1543 | NE1059 | Multicopper oxidase type 1. | Putative urea transporter. | 0.725 |
Heph,sla | NE1241 | NE1543 | NE1241 | Multicopper oxidase type 1. | Tyrosinase. | 0.692 |
Heph,sla | Ptgs1 | NE1543 | NE1240 | Multicopper oxidase type 1. | Putative cyclooxygenase-2. | 0.758 |
Heph,sla | Rh50 | NE1543 | NE0448 | Multicopper oxidase type 1. | Ammonium transporter family. | 0.546 |
Heph,sla | rkpA | NE1543 | NE1389 | Multicopper oxidase type 1. | Similar to (AF285636) putative type I polyketide synthase WcbR [Burkholderia mallei], evalue=0.00e+00, 41% identity. | 0.434 |
NE0187 | ALOX5 | NE0187 | NE1239 | Hypothetical protein. | Lipoxygenase. | 0.767 |
NE0187 | Heph,sla | NE0187 | NE1543 | Hypothetical protein. | Multicopper oxidase type 1. | 0.743 |
NE0187 | NE1059 | NE0187 | NE1059 | Hypothetical protein. | Putative urea transporter. | 0.725 |
NE0187 | NE1241 | NE0187 | NE1241 | Hypothetical protein. | Tyrosinase. | 0.767 |
NE0187 | NE1444 | NE0187 | NE1444 | Hypothetical protein. | TPR repeat. | 0.690 |
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