STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NE2267Glycosyl transferases group 1. (384 aa)    
Predicted Functional Partners:
NE2266
Glycosyl transferases group 1.
 
    0.925
NE2269
Glycosyl transferases group 1.
   
0.894
NE2268
Hypothetical protein; COGs COG1175.
  
    0.808
NE2270
Hypothetical protein; COGs COG0439.
 
    0.678
rkpA
Similar to (AF285636) putative type I polyketide synthase WcbR [Burkholderia mallei], evalue=0.00e+00, 41% identity.
   
 
 0.591
RecQ
recQ; ATP-dependent DNA helicase.
    
 
 0.543
pgsA,ywtB
Possible poly-gamma-glutamate synthesis protein [UI:99417512].
  
    0.474
glgB
Glycoside hydrolase family 13:Isoamylase N-terminus; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.470
NE1795
Glutamine amidotransferase class-II:Asparagine synthase.
  
     0.460
NE0879
Esterase/lipase/thioesterase family active site:Lipase (Class 3).
   
   0.456
Your Current Organism:
Nitrosomonas europaea
NCBI taxonomy Id: 228410
Other names: N. europaea ATCC 19718, Nitrosomonas europaea ATCC 19718, Nitrosomonas europaea str. ATCC 19718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.