STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL18003.1Hypothetical protein. (576 aa)    
Predicted Functional Partners:
SEM22044.1
Amino acid adenylation domain-containing protein.
  
 
 0.884
SEM03126.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
  
  0.707
SEL51358.1
Hypothetical protein.
    
   0.612
SEM29562.1
Quinoprotein glucose dehydrogenase.
  
  
  0.584
SEL57172.1
Cytochrome c, mono-and diheme variants.
  
  
  0.551
SEM22020.1
Amino acid adenylation domain-containing protein.
  
 
 0.539
SEL17957.1
PAS domain S-box-containing protein.
       0.519
SEL74625.1
Hypothetical protein.
  
     0.474
SEL58133.1
Endo-1,4-beta-xylanase.
   
   0.447
SEL58449.1
Carbohydrate binding domain-containing protein.
   
   0.447
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.