STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL52426.1Allosteric NADP-dependent malic enzyme. (764 aa)    
Predicted Functional Partners:
SEK52494.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
 0.989
SEL79955.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.989
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
 
 0.983
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.981
SEK95667.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.979
SEL53041.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
    
 0.968
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.966
SEK51615.1
FAD/FMN-containing dehydrogenase.
  
 
 0.958
SEL25287.1
L-lactate dehydrogenase (cytochrome).
    
 0.957
SEL16935.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.949
Your Current Organism:
Maribacter orientalis
NCBI taxonomy Id: 228957
Other names: Bacteroidetes bacterium KMM 3947, CCUG 48008, DSM 16471, KCTC 12967, KMM 3947, M. orientalis, Maribacter orientalis Nedashkovskaya et al. 2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.