STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_07795Translation initiation factor IF-2B subunit delta; eIF-2BB; catalyzes the binding of GTP to IF2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eIF-2B alpha/beta/delta subunits family. (323 aa)    
Predicted Functional Partners:
eif2a
Translation initiation factor IF-2 subunit alpha; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family.
   
 0.907
eif2g
Translation initiation factor IF-2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
   
 0.900
CF15_07790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
    
0.892
CF15_03585
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.680
CF15_07590
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.680
CF15_07945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.680
CF15_08180
Sugar-phosphate nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.680
CF15_00610
Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.614
rbcL
Ribulose 1,5-bisphosphate carboxylase; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily.
    
 0.613
CF15_07785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.560
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.