STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CF15_08370Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
CF15_01790
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.803
CF15_08375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.701
CF15_08380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.649
CF15_01775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.615
CF15_08325
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.613
CF15_08310
Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.598
CF15_08385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.503
CF15_00240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.402
CF15_01530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.402
CF15_04210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.402
Your Current Organism:
Pyrodictium occultum
NCBI taxonomy Id: 2309
Other names: DSM 2709, JCM 9393, NBRC 100438, P. occultum, strain PL-19
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.