CVT26_006633 protein (Gymnopilus dilepis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT26_006633

Uncharacterized protein. (206 aa)

Predicted Functional Partners:

CVT26_008009

0.959

CVT26_007172

0.947

CVT26_011245

0.946

CVT26_013731

0.942

CVT26_002072

0.935

CVT26_010477

0.935

CVT26_013384

0.930

CVT26_011395

0.930

CVT26_011870

0.929

CVT26_007301

0.928

Your Current Organism:

Gymnopilus dilepis

NCBI taxonomy Id: 231916
Other names: Agaricus dilepis, G. dilepis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT26_002072	CVT26_006633	A0A409VBX6	A0A409Y2S7	Uncharacterized protein.	Uncharacterized protein.	0.935
CVT26_002072	CVT26_007172	A0A409VBX6	A0A409W0E6	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CVT26_002072	CVT26_007301	A0A409VBX6	A0A409VLW5	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT26_002072	CVT26_008009	A0A409VBX6	A0A409YJI6	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT26_002072	CVT26_010477	A0A409VBX6	A0A409Y0L0	Uncharacterized protein.	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
CVT26_002072	CVT26_011245	A0A409VBX6	A0A409VYX5	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
CVT26_002072	CVT26_011395	A0A409VBX6	A0A409W8T3	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT26_002072	CVT26_011870	A0A409VBX6	A0A409W5H3	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
CVT26_002072	CVT26_013384	A0A409VBX6	A0A409VUY8	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT26_002072	CVT26_013731	A0A409VBX6	A0A409YWJ9	Uncharacterized protein.	RPOLD domain-containing protein.	0.999
CVT26_006633	CVT26_002072	A0A409Y2S7	A0A409VBX6	Uncharacterized protein.	Uncharacterized protein.	0.935
CVT26_006633	CVT26_007172	A0A409Y2S7	A0A409W0E6	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.947
CVT26_006633	CVT26_007301	A0A409Y2S7	A0A409VLW5	Uncharacterized protein.	Uncharacterized protein.	0.928
CVT26_006633	CVT26_008009	A0A409Y2S7	A0A409YJI6	Uncharacterized protein.	Uncharacterized protein.	0.959
CVT26_006633	CVT26_010477	A0A409Y2S7	A0A409Y0L0	Uncharacterized protein.	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.935
CVT26_006633	CVT26_011245	A0A409Y2S7	A0A409VYX5	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.946
CVT26_006633	CVT26_011395	A0A409Y2S7	A0A409W8T3	Uncharacterized protein.	Uncharacterized protein.	0.930
CVT26_006633	CVT26_011870	A0A409Y2S7	A0A409W5H3	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.929
CVT26_006633	CVT26_013384	A0A409Y2S7	A0A409VUY8	Uncharacterized protein.	Uncharacterized protein.	0.930
CVT26_006633	CVT26_013731	A0A409Y2S7	A0A409YWJ9	Uncharacterized protein.	RPOLD domain-containing protein.	0.942