STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS52840.1SWIM zinc finger domain-containing protein. (557 aa)    
Predicted Functional Partners:
AIS51277.1
Beta-galactosidase trimerization domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.760
AIS51370.1
Cell surface receptor IPT/TIG domain-containing protein.
  
     0.747
AIS53042.1
Outer membrane lipoprotein-sorting protein-like protein.
  
     0.696
AIS51468.1
Aminopeptidase-like protein.
  
     0.682
AIS51669.1
Spore germination protein-like gmad2.
  
     0.678
AIS53037.1
Hypothetical protein.
  
     0.653
AIS53559.1
Transcriptional regulator, LuxR family.
  
     0.637
AIS52979.1
CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
 
     0.635
tlp
Protein Tlp; Belongs to the Tlp family.
  
     0.619
celD
Cellulose biosynthesis protein CelD.
  
     0.611
Your Current Organism:
Thermoanaerobacter kivui
NCBI taxonomy Id: 2325
Other names: ATCC 33488, Acetogenium kivuense, Acetogenium kivui, DSM 2030, T. kivui, Thermoanaerobacter kivuense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.